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Том 64, № 3 (2019)

Molecular Biophysics

On the Width of Conformational Transitions of Biologically Important Macromolecules under the Influence of Pressure

Potekhin S., Khusainova R.

Аннотация

Abstract—A theoretical assessment of the half-width of the conformational transition of macromolecules caused by an increase in pressure is presented. It is shown that the half-width is determined mainly by the change (jump) of the volume during the transition. A formula similar to van-Goff’s formula for the half-width of transitions caused by temperature increase is obtained, which makes it possible to estimate the effective change in volume for a one-stage transition under the influence of pressure by its half-width. The estimates show that the “gel–liquid crystal” transitions in phospholipids have a half-width of several megapascals (tens of atmospheres), while in proteins it is approximately 100 times higher and equals hundreds of megapascals (several thousand atmospheres). It is shown that the volume jump can significantly change in the interval from the beginning to the end of the transition during denaturation of proteins under the influence of pressure.

Biophysics. 2019;64(3):317-322
pages 317-322 views

An In silico Search for the Sites of Potential Binding with Charged and Hydrophobic Carriers in the Molecules of Endoinulinase from Aspergillus ficuum and Exoinulinase from Aspergillus awamori

Sakibaev F., Holyavka M., Makin S., Artyukhov V.

Аннотация

Abstract—The composition and location of charged and hydrophobic amino-acid residues in the endoinulinase (3SC7) and exoinulinase (1Y4W) molecules have been investigated. The percentage of different types of amino acids on the surface of enzyme molecules has been determined. It has been found that the charged and hydrophobic amino-acid residues are distributed unevenly over the surface of the molecules and form the sites of local clusters. It has been shown that positively charged carriers are the most promising for the immobilization of endoinulinases; they may interact with one of the following sites on the surface of the enzyme molecules, which are remote from the active center and contain Glu239, Glu243, Glu246, Glu247, and Asp275 (site 1); Asp399, Asp424, Glu433, Glu452, Glu453, Asp454, and Glu497 (site 2); Asp37, Asp92, Glu93, and Glu516 (site 3). Negatively charged carriers are most promising for exoinulinase, because the binding sites for these carriers that contain Lys225 and Lys247 (site 1); His80, Lys84, Lys118, and Lys121 (site 2); Lys381, Arg382, Arg387, Lys390, Lys407, Lys415, Lys417, Lys479, Arg526, and Lys531 (site 3) are located on the surface of the enzyme molecules remote from the active center. Hydrophobic carriers are the least promising, because the amino-acid residues on the surface of the enzymes, to which the polymers can bind, are in the area of the active center; these residues are Tyr39, Pro62, Val66, Leu172, Gly196, and Gly259, in the case of endoinulinase; and Tyr47, Trp65, Pro85, Val86, Leu89, Leu161, Pro232, Gly237, Pro266, Pro270, Val293, Pro298, Gly299, and Gly320, in the case of exoinulinase.

Biophysics. 2019;64(3):323-330
pages 323-330 views

A Study of the Structure of Trypsin-Like Serine Proteinases. 2. A Study of Tryptophan Fluorescence in Variants of Miniplasminogen with an Altered Primary Structure

Belyanko T., Feoktistova E., Skrypina N., Skamrov A., Gurskii Y., Rutkevich N., Dobrynina N., Bibilashvilli R., Savochkina L.

Аннотация

Abstract—Variants of miniplasminogen with an altered primary structure have been designed to study previously described changes in tryptophan fluorescence during plasminogen activation by urokinase. Miniplasminogens that contain the Trp141, Trp215, and Leu217 substitutions (the position of the amino-acid residue is specified by the Chymotrypsin nomenclature) have been tested. The activation of mutants containing a single tryptophan substitution induced changes in the fluorescence spectrum. No changes in the fluorescence spectrum were observed in the case of miniplasminogen containing a double tryptophan substitution. This indicates that both Trp141 and 215 contribute to the fluorescence spectrum shift; however, as suggested previously, the contribution of changes in the Trp215 microenvironment is greater. The Trp141, Trp215, and Leu217 amino-acid substitutions in miniplasminogen have no effect on the rate of plasminogen activation by urokinase. The replacement of the conserved Trp215 residue in serine proteases led to a significant reduction but not loss of the amidolytic activity of plasmin.

Biophysics. 2019;64(3):331-338
pages 331-338 views

A Database of Potential Reading Frame Shifts in Coding Sequences from Different Eukaryotic Genomes

Suvorova Y., Pugacheva V., Korotkov E.

Аннотация

Abstract—A new data bank containing potential reading frame shifts was developed. A new mathematical method based on the use of the genetic algorithm and dynamic programming was used to search for potential reading frame shifts. The data bank includes coordinates of potential reading frame shifts for coding sequences of 76 eukaryotic genomes from the Ensembl genome browser version 86. The database is located at: http://victoria.biengi.ac.ru/cgi-bin/frameshift/index.cgi. Among all the analyzed genomes approximately 23% of the coding sequences have a reading frame shift. Type I and type II errors are at levels of approximately 11 and 30%. A Web server to search for potential reading frame shifts, which is located at: http://victoria.biengi.ac.ru/fsfinder, was developed simultaneously with the data bank. The server can be used to search for potential reading frame shifts in newly defined coding sequences.

Biophysics. 2019;64(3):339-348
pages 339-348 views

Changes in the Level of DNA Damage in Mouse Cells Induced by Atmospheric Factors

Kuznetsova E., Sirota N., Zenchenko T.

Аннотация

Abstract—Changes in the level of DNA damage induced by atmospheric factors were evaluated from the percentage of tail DNA (%TDNA) in the comet assay of mouse cells for blood leukocytes, Ehrlich ascites carcinoma, and P388 lymphocytic leukemia. It was shown that (1) the values of DNA damage of blood leukocytes (%TDNA) were high within narrow ranges of atmospheric temperature (from –4°С to +3°С) and atmospheric partial oxygen contents within 298–304 mg/L; (2) the range of variations in %TDNA of leukocytes increased with increasing geomagnetic activity; (3) the changes in %TDNA of intact and X-irradiated (4 Gy) leukocytes and of tumor cells were associated with changes in air temperature; and (4) %TDNA correlated with atmospheric temperature in both types of intact tumor cells and irradiated P388 cells. Thus, variations in %TDNA appear to be caused by reactive oxygen species generated in the environment at temperatures of phase transitions of water. It is conceivable that changes in the basal %TDNA of cells modulate their radiation response.

Biophysics. 2019;64(3):349-357
pages 349-357 views

Cell Biophysics

Monitoring of the Photosynthetic Activity of the Microalgae Chlorella under Nitrogen Depletion Conditions

Plyusnina T., Khruschev S., Frolov A., Degtereva N., Konyukhov I., Pogosyan S., Riznichenko G., Rubin A.

Аннотация

Abstract—The paper presents the results of monitoring of the photosynthetic activity of the green microalga Chlorella. A thermophilic strain of Chlorella with a high rate of cell division was cultivated in a photobioreactor. Three medium variants with different mineral composition were used. Chlorophyll fluorescence induction curves and microalgal suspension absorption spectra were recorded every hour during 40-hour culture growth for each medium. The method of spectral multiexponential approximation we have developed was used to analyze 120 induction curves obtained after monitoring. This method revealed the dynamics of gradual changes in the number of phases of induction curves, their amplitudes and characteristic times during culture growth. The relationship between the parameters of induction curves and electron transfer processes in the reaction center of photosystem II allowed for interpretation of the changes in the shape of the induction curves in terms of the processes in the reaction center of photosystem II. The spectral multiexponential approximation method was shown to be highly sensitive to physiological state of microalgae and suitable for analyzing a huge amount of experimental data. The physiological processes accompanying the depletion of nitrogen in the environment are discussed.

Biophysics. 2019;64(3):358-366
pages 358-366 views

Correction of Cold Damage to Mammalian Erythrocytes by Chlorpromazine to Influence the Dynamic Structure of a Membrane

Shpakova N., Orlova N., Yershov S.

Аннотация

Abstract—The resistance of mammalian erythrocytes (human, dog, horse, bull, and rabbit) to cold shock in the presence of chlorpromazine was studied; its effect on the state of erythrocyte membranes was investigated. The bond strength between membrane phospholipids of mammalian erythrocytes and the characteristics of the cold shock of these cells was determined with the correlation analysis. It has been established that erythrocytes of mammals whose membranes contain a high content of sphingomyelin and phosphatidylethanolamine and a low content of phosphatidylcholines are more resistant to cold shock. Chlorpromazine showed high efficiency in protecting mammalian erythrocytes against cold shock. The dynamic structure of membranes of human erythrocytes treated with the chlorpromazine was studied by EPR of spin-probes. The use of a set of spin-labeled probes: palmitic acid amide, 5-DOXYL stearic acid, and 16-DOXYL stearic acid, which allow studying the micro-viscosity parameters of the lipid bilayer of erythrocyte membranes in the transmembrane direction, made it possible to establish the locations of chlorpromazine action, namely, in the region of polar heads and hydrophobic tails of membrane phospholipids.

Biophysics. 2019;64(3):367-373
pages 367-373 views

A Hypomagnetic Field Modulates the Susceptibility of Erythrocytes to tert-Butyl Hydroperoxide in Rats

Terpilovskii M., Khmelevskoy D., Shchegolev B., Surma S., Stefanov V., Sukharzhevskii S., Goncharov N.

Аннотация

Abstract—Red blood cells of rats were exposed to the earth’s magnetic field and an attenuated magnetic field in the presence of tert-butyl hydroperoxide to induce oxidative stress. Spectral analysis within the wavelength range of 500–700 nm was used to estimate the concentration of three forms of hemoglobin: oxyhemoglobin, methemoglobin, and hemichrome, released during erythrocyte hemolysis. The concentration of reactive oxygen species was determined in samples by spin trapping using electron paramagnetic resonance. It was found that after 4 h of incubation at high tert-butyl hydroperoxide concentrations (>700 μM), red blood cells that were exposed to an attenuated magnetic field released considerably more (p < 0.05) hemoglobin, mostly methemoglobin. After 24 h of incubation at low tert-butyl hydroperoxide concentrations (≤350 μM), erythrocytes that were exposed to the earth’s magnetic field released relatively more (p < 0.001) hemoglobin, with methemoglobin as a major form of total hemoglobin. Red blood cells exposed to the attenuated magnetic field generated more oxygen radicals than cells exposed to the earth’s magnetic field. Under certain oxidative stress conditions, the attenuated magnetic field can impair the functional state of red blood cells and provoke cell death. However, low concentrations of reactive oxygen species can neutralize attenuated magnetic field effects.

Biophysics. 2019;64(3):374-380
pages 374-380 views

The Influence of Dinitrosyl Iron Complexes on the Physicochemical Characteristics of Rat Blood Components

Timoshin A., Lakomkin V., Ruuge E.

Аннотация

Abstract—The effect of injected intravenously dinitrosyl iron complexes with glutathione ligand on the structural and conformational characteristics of albumin, which is a primary ligand of these complexes in plasma, and on molecules of the lipid phase in the erythrocyte membrane, which constitute the microenvironment of dinitrosyl iron complexes in erythrocytes, was analyzed. The analysis of EPR spectra of 5- and 16-DOXYL stearic acid spin probes in plasma and erythrocyte suspensions before and after injection of dinitrosyl iron complexes with glutathione was performed in the experiments. It has been found that injection of these complexes into an organism does not affect the molecular motion in albumin hydrophobic regions in plasma and erythrocyte membranes, while at the same time they stimulate incorporation of charged spin labels into the erythrocyte membrane. Apparently, this was due to a change in the charge on the outer surface of the erythrocytes.

Biophysics. 2019;64(3):381-386
pages 381-386 views

The Combined Effect of Glucose and β-Hydroxybutyrate on the Membrane Potential of Synaptosomal Mitochondria

Dubouskaya T., Hrynevich S., Fedorovich S.

Аннотация

Abstract—The ketogenic diet is used as a treatment for different brain diseases. It involves replacement of dietary carbohydrates with fat, which leads to production of ketone bodies, predominantly β-hydroxybutyrate. The mechanism of the protective effect of the ketogenic diet remains poorly studied. In this work, the combined influence of glucose and β-hydroxybutyrate on the potentials of the synaptosomal plasma membrane and the mitochondrial membrane was investigated. It was found that the presence of ketone bodies in a glucose-containing incubation medium did not affect the synaptosomal plasma membrane potential, in contrast to what was previously observed for the neuronal plasma membrane. It was shown that incubation of synaptosomes in the medium containing only β-hydroxybutyrate resulted in mitochondrial depolarization (ΔΨ change). At the same time, the presence of ketone bodies in the glucose-containing incubation medium led to mitochondrial hyperpolarization. The observed depolarization was partially compensated by an increase in mitochondrial ΔpH, which was induced by mitochondrial depolarization as such, but not by the presence of β-hydroxybutyrate. Thus, ketone bodies can be utilized by synapses as energy substrates, but β-hydroxybutyrate is a less effective energy source than glucose.

Biophysics. 2019;64(3):387-392
pages 387-392 views

Modulation of the Acetylcholine-Induced Input Current by Noopept in Helix Lucorum Neurons

Murzina G., Pivovarov A.

Аннотация

Abstract—Possible causes of the positive modulating effect of noopept (in a concentration range of 0.1 to 10 nM) on the amplitude of the acetylcholine-induced input current are analyzed using a developed mathematical model. The results revealed that the calculated and experimental current curves coincide when the number of nicotinic acetylcholine receptors on the neuron membrane is increased or the efficiency of muscarinic acetylcholine receptors is changed.

Biophysics. 2019;64(3):393-399
pages 393-399 views

The Fractal Features of the Background Activity of Neurons in the Auditory Center of the Frog Midbrain

Bibikov N., Makushevich I., Dymov A.

Аннотация

Abstract—Statistics were obtained for background firing activity recorded from several neurons of the auditory center of the midbrain (semicircular torus) in the common frog. The methods were those used to analyze the temporal flow of fractal point processes. Most neurons showed a power-law increase in the variance-to-mean ratio (Fano factor) of pulse number with the time window increasing from hundreds of milliseconds to several tens of seconds, although cells whose background firing activity was close to random were also observed. A method based on the registration of local features (the Allan factor as a function of the same time window) confirmed the fractal properties for many cells. A power-law growth of the Allan factor usually began at large time windows. The third method of fractal analysis (the Hurst index) also argued in favor of the randomness and fractality of background firing activity. The relationships with other statistics of random point processes were analyzed for the fractal characteristics. A comparison with data obtained for neurons of the medulla oblongata indicated that the variability of firing activity slight increases along the auditory pathway.

Biophysics. 2019;64(3):400-409
pages 400-409 views

The Effect of Damage of a Plasma-Treated Polyurethane Surface on Bacterial Adhesion

Morozov I., Kamenetskikh A., Beliaev A., Scherban M., Lemkina L., Eroshenko D., Korobov V.

Аннотация

Abstract—Elastic polyurethanes are flexible materials used in biomedical products. Plasma treatment is a promising method of surface modification. However, external deformation of the elastic substrate could damage the modified layer and provoke various undesirable consequences. In this work, two elastic polyurethanes with different stiffness have been studied. The materials were treated by plasma immersion implantation of nitrogen ions (with the energy of 1 and 3 keV). As a result, the relief and hydrophobicity of the surfaces changed such that the adhesion of both Gram-positive (Staphylococcus) and Gram-negative (Escherichia coli) bacteria decreased. Cyclic uniaxial deformation damages the treated surfaces: transverse cracks and longitudinal folds are formed. These changes increase bacterial adhesion to values that exceeding that on untreated materials. All features of the modified surfaces correlated both with the properties of original substrate and with the treatment parameters. Bacterial adhesion is affected mainly by the peculiarities of the relief structure.

Biophysics. 2019;64(3):410-415
pages 410-415 views

A Study of the Effect of Terahertz Electromagnetic Radiation on Microbial Cell Viability

Boev S., Vagin A., Solomatin S., Savostyanov D., Siluyanov V., Shmakov A., Zaitsev B., Teplykh A., Borodina I., Karavaeva O., Guliy O.

Аннотация

Abstract—The effect of pulsed terahertz radiation at a wavelength of 66 μm, a pulse duration of 100 ns, and a pulse energy of 200 mJ on a suspension of microbial cells was studied. The effect of terahertz radiation was shown to cause cell death at a value of total energy of ~6 J. Since the temperature of the cell suspension after radiation remained almost unchanged, it implies that pulsed terahertz radiation exhibited a non-thermal effect. Methods of standard microbial plating, electron microscopy, electroacoustic analysis, and spectral analysis were used in order to verify the results. These experiments make it possible to control the viability of bacterial cells using terahertz radiation with certain parameters.

Biophysics. 2019;64(3):416-423
pages 416-423 views

Modification of Redox Processes in C6 Glioma Cells by 2-Hexadeсenal, the Product of Sphingolipid Destruction

Amaegberi N., Semenkova G., Lisovskaya A., Kvacheva Z., Shadyro O.

Аннотация

Abstract—2-Hexadecenal is an unsaturated aldehyde that is formed during the free radical destruction of sphingolipids under oxidative stress and exhibits biological activity by inhibiting proliferation and inducing apoptosis. The results of studying the modifying effect of this aldehyde on the redox processes that occur in rat C6 glioma cells are presented. It has been shown that cultivation of cells with 2-hexadecenal (at concentrations from 3.5 to 35 μmol/L) leads to a significant increase in the yield of menadione-induced superoxide anion radicals; and at higher concentrations, to its decrease. It has been revealed that under the action of 2-hexadecenal on cells, the additional production of \({\text{O}}_{2}^{{\centerdot - }}\) is completely suppressed in the presence of inhibitors of stress-activated MAP kinases involved in apoptosis triggering, such as JNK, p38, and ERK1/2. The modifying effects of 2-hexadecenal begin to occur at the early stages of its interaction with cells, which is manifested in the increased production of superoxide anion radicals by mitochondria and a decrease in the intracellular level of reduced glutathione. It has been suggested that the modification of the redox state of C6 cells occurs at the initial stage of the intracellular signaling process, in which 2-hexadecenal plays the role of a signaling molecule.

Biophysics. 2019;64(3):424-430
pages 424-430 views

Induction of Oxidative Stress in Tumor Cells: A New Strategy for Drug Therapy of Malignant Tumors

Korman D., Ostrovskaya L., Kuz’min V.

Аннотация

Abstract—Tumor cells have a higher basal ROS level than normal cells. This phenomenon may provide grounds for the development of novel antitumor drugs that are capable of selectively inducing oxidative stress in tumor cells. This approach can involve agents that induce ROS production and/or inhibit cellular enzymatic antioxidant systems. Thioredoxin reductase is a key enzyme in such systems. Overexpression of thioredoxin reductase has been shown in several types of tumors of hematopoietic, lymphoid, and other tissues. The results of studies of the antitumor activities of various synthetic and natural substances that are able to inhibit thioredoxin reductase are summarized. It is shown that thioredoxin reductase inhibition results in an increase in ROS level in tumor cells and oxidative damage of cells followed by apoptosis mainly via the mitochondrial pathway.

Biophysics. 2019;64(3):431-439
pages 431-439 views

Complex Systems Biophysics

Simulation of Soybean Phenology with the Use of Artificial Neural Networks

Taratuhin O., Novikova L., Seferova I., Kozlov K.

Аннотация

The phenology of soybean explicitly indicates environmental changes and strongly depends on temperature and day length. We adapted an artificial neural network model to predict the time to flowering in nine early maturing soybean accessions in the Northwest region of Russia. We added scaling constants for network inputs, optimized the high and low temperature thresholds and base day length, and implemented a new model written in Python using the Keras and TensorFlow libraries. Experimental data obtained in 1999–2013 in Pushkin (in the Leningrad region) and Kuban were used for training 121 model parameters; after training the mean-root-square error became smaller, 0.026. The investigated accessions had a reduced upper temperature threshold compared to the literature data (23 instead of 30°С) and increased low temperature threshold (12 instead of 5°С). The extension of day length from 12 to 13 h confirmed the adaptation to a longer day. The average prediction error was improved by approximately 2 days compared to the previous model of temperature minima. We generated daily weather for different future greenhouse gas emission scenarios and predicted time to flowering for nine soybean accessions in a changing climate for 2019–2030 and two planting days, that is, May 1 and May 10. The predicted time to flowering decreases to 2030 for most accessions and scenarios but may remain constant or fluctuate in several cases. The difference in the mean between 39.21 days in the experimental data and 36.33 days in the modeling results for 2030 is statistically significant according to Mann–Witney–Wilcoxon criterion (5423.5, P = 0.0097 < 0.01). Consequently, the results confirmed the predictive power of the developed model.

Biophysics. 2019;64(3):440-447
pages 440-447 views

Electrochemical Feedback as a Possible Mechanism for Generating the Low-Frequency Component of Bioelectrical Activity of the Brain

Masherov E.

Аннотация

Abstract—A model of electroencephalogram (EEG) generation was proposed to include not only summation of postsynaptic potentials, but also fluctuations in the regulation of a constant potential level. The model explains a number of phenomena observed predominantly in the low-frequency EEG range.

Biophysics. 2019;64(3):448-453
pages 448-453 views

Mathematical Simulation of the Rabbit Heterogeneous Intact Sinoatrial Node Using Similitude Theory

Galanin V.

Аннотация

Abstract—In this work, the electrical activity of the heterogeneous intact sinoatrial node at interaction with the atrial myocardium is simulated based on a detailed approach. The reduction of this model used the methods of the theory of similarity. The results of the calculation of the reduced model are compared with the solutions obtained in the initial model. The model also found that an increase in the number of non-excitable sites in the atrial myocardium bordering the pacemaker causes a slowdown in the overall rhythm of electrical activity.

Biophysics. 2019;64(3):454-462
pages 454-462 views

The Radioprotective Effects of Low-Intensity Laser Radiation on Rat Peripheral Blood Cells

Zalesskaya G., Nasek V., Zilberman R.

Аннотация

Abstract—The radioprotective effect of low-intensity laser radiation on blood cells was studied on Wistar rats. The following procedures was carried out: single total body γ-radiation (dose of 3 Gy) of rats; over-vein irradiation with continuous laser radiation (λ = 670 nm); and combined γ- and laser irradiation, which varied among different series of experiments according to the number of procedures and the energy density of the laser radiation (2.5 J/cm2, 1.25 J/cm2). The influence of γ- and laser radiation on the number of peripheral blood cells in rats, the activity of antioxidant defense enzymes (superoxide dismutase and catalase), and on the blood absorption spectra in regions sensitive to its oxygenation were studied. On the 4th day after γ-irradiation, the radioprotective effect of low-intensity laser radiation was manifested as an increase in the average number of leukocytes (up to 1.4 times) and lymphocytes (up to 1.8 times) in comparison with reduced γ-irradiation, in an increase in the relative lymphocyte proportion in the leukocyte population (up to 1.5 times), and in an increase in the activities of catalase and superoxide dismutase, which were decreased by the γ-irradiation. It was found that the changes in the number of erythrocytes, leukocytes, lymphocytes, and superoxide dismutase activity initiated by γ-radiation alone and by combined laser and γ-radiation differed in individual rats and depended on individual initial values. The molecular mechanisms of the observed photo-radiobiological effects are discussed.

Biophysics. 2019;64(3):463-469
pages 463-469 views

The Effects of Helium-Generated Cold Plasma on the Parameters of Heart Rate Variability in Rats

Martusevich A., Krasnova S., Peretyagin P., Galka A., Golygina E., Kostrov A.

Аннотация

Abstract—The goal of the present study was to evaluate the mechanism of the systemic response to helium-generated cold plasma based on heart rate variability indices in rats. The experiments were performed using 20 male Wistar rats. The animals were divided into two equal groups containing 10 rats per each group. In animals of the control group, a single measurement of the microcirculation indices was performed. The rats of the experimental group were exposed to helium-generated cold plasma applied onto the skin on the back (1 min) for 10 days. Helium-generated cold plasma was produced with a special device designed at the Institute of Applied Physics (Nizhny Novgorod, Russia) using the principle of microwave-induced ionization of the gas stream. The electrocardiograms were recorded using a Polyspectr diagnostic complex (Ivanovo, Russia). The statistical analysis of the electrocardiograms and calculation of spectral parameters was performed according to the standard algorithms. It has been found that the exposure to helium-generated cold plasma led to the formation of non-specific (adaptive) changes in heart rate. These changes manifested in the form of moderate tachycardia, the activation of sympathetic stimulation of myocardium, and a proportional decrease in the spectrum power within all frequency ranges.

Biophysics. 2019;64(3):470-473
pages 470-473 views

Application of the Miles Assay to Study Microvascular Permeability in Ischemia–Reperfusion Injury of the Small Intestine

Gordeeva A., Tikhonova I., Shirinsky V., Novoselov V.

Аннотация

Abstract—The Miles assay using Evans Blue dye is a conventional method to assess vascular permeability. The penetration Evans dye into intestinal tissue was studied in the early reperfusion phase of ischemia–reperfusion injury to the small intestine. Significant destruction of villus microvessels and an increase in vascular permeability to plasma proteins were observed in the early reperfusion phase, impairing the blood flow at the microvasculature level based on evidence from histology and laser Doppler flowmetry. Evans Blue accumulated to the highest concentration in intestinal tissue after being injected into the bloodstream prior to 60-min ischemia; the lowest level was detected when the dye was injected after 15-min reperfusion. Changes in the dye content in intestinal tissue therefore depended on the number of vessels that remain intact at the time of dye injection at various stages of ischemia–reperfusion. Evans Blue observed in tissue was assumed to reflect the degree of vessel preservation in a study of ischemia–reperfusion injury of the small intestine, rather than reporting the degree of vascular permeability, as commonly believed.

Biophysics. 2019;64(3):474-479
pages 474-479 views

A Method to Record the Surface Temperature Distribution of the Skin as a Safe and Ergonomic Approach to Diagnosis and Monitoring in Breast Cancer

Klyukin L., Namiot V., Udaltsov S.

Аннотация

Abstract—This article discusses the relevant results on early and safe detection of breast cancer with a thermal volume tomography (TVT) device produced in Russia. The device records and analyzes the spatial temperature distribution on the skin in the tumor region. The resulting dataset can be analyzed using artificial intelligence methods, which make it possible to efficiently choose the treatment strategy by selecting optimal treatments at the preclinical stage of breast cancer.

Biophysics. 2019;64(3):480-484
pages 480-484 views

Analysis of the Flexural Rigidity of Vascular Grafts by Numerical Simulation Methods

Ovcharenko E., Klyshnikov K., Rezvova M., Antonova L., Glushkova T., Vinokurov S., Sevostyanova V., Krivkina E., Batranin A., Zakharov Y., Borisov V., Kudryavtseva Y., Barbarash L.

Аннотация

Abstract—A numerical evaluation was performed to assess the efficiency of reinforcement of small-diameter vascular grafts made of polymeric materials. Based on the finite-element analysis, an algorithm was developed to find the optimal parameters for the reinforcing layer and to evaluate its stress–strain state under conditions of longitudinal bending simulation. The findings may be useful for industrial and laboratory trials in studies of the strengthening properties of similar products.

Biophysics. 2019;64(3):485-492
pages 485-492 views

Errata

Erratum to: The Search for Ways to Improve the Catalytic Activity of Encapsulated Horseradish Peroxidas

Fomkina M., Minkabirova G., Montrel A., Ibadullaeva S.
Biophysics. 2019;64(3):493-493
pages 493-493 views