


Том 61, № 5 (2016)
- Жылы: 2016
- Мақалалар: 16
- URL: https://ogarev-online.ru/0006-3509/issue/view/9094
Molecular Biophysics
A soft X-ray synchrotron study of the charge state of iron ions in the ferrihydrite core of the ferritin Dps protein in Escherichia coli
Аннотация
The Escherichia coli Dps protein belongs to a specific family of bacterial ferritins; it is a nanosized particle that contains an inorganic core (~5 nm in diameter) and a protein shell with a size of 8–9 nm. The protein shell consists of 12 identical subunits with the known crystal structure of a dodecamer. The composition and structure of the core have been less studied. The core formation is associated with the oxidation products of Fe2+ ions in the ferroxidase centers of the protein. Thus, Fe2O3 oxides are the main compounds of the core. However, the mineralization properties of Fe2+ ions under anaerobic conditions in vitro may indicate a more complicated composition of the core in the native Dps protein. This paper presents a technique for the preparation of purified Dps samples for ultrahigh vacuum synchrotron experiments by X-ray absorption near edge structure spectroscopy of the iron absorption edge in the soft X-ray region. The conducted synchrotron experiments have revealed the presence of both trivalent and divalent iron ions in the octahedral and tetrahedral environment of oxygen atoms in the prepared biological samples. This points to a complex ionic composition of the core even in the native Dps protein, which has been isolated from aerobically grown bacteria.



The effects of stabilizing mutations in the central part of the α-chain of tropomyosin on the structural and functional properties of αβ-tropomyosin heterodimers
Аннотация
The effects of the D137L/G126R double mutation in the central part of the tropomyosin α-chain via the simultaneous replacement of two highly conserved non-canonical residues, viz., Asp137 and Gly126, by canonical residues Leu and Arg, respectively, on the properties of the αβ-tropomyosin heterodimer have been studied. It has been shown using circular dichroism that this mutation substantially increases the thermal stability of αβ-tropomyosin heterodimers, which, nevertheless, remains lower than that of αα-tropomyosin homodimers with these mutations in both α-chains. The stability of tropomyosin complexes with F-actin has also been studied by measuring the temperature dependences of their dissociation, which is detected by a decrease in light scattering. It has been revealed that αβ-tropomyosin heterodimers carrying the D137L/G126R mutation in the α-chain dissociate from the surface of actin filaments at a higher temperature than ββ-homodimers but at a lower temperature than αα-homodimers with these mutations in both α-chains. It has also been shown using the in vitro motility assay that D137L/G126R substitution in the α-chain increases the sliding velocity of regulated actin filaments in the case of αα-homodimers, while it noticeably decreases the velocity in the case of αβ-tropomyosin heterodimers. Thus, we can conclude that mutations in one of the chains of the tropomyosin dimeric molecule may have different effects on the properties of tropomyosin homodimers and heterodimers.



A new role for myoglobin in cardiac and skeletal muscle function
Аннотация
For many years, myoglobin was considered as an intracellular globin involved in oxygen transport and storage in cardiac and skeletal muscles. Following the discovery of its ability to convert nitrite into nitric oxide during hypoxia, myoglobin was shown to play a new role in the hypoxic signaling pathway that regulates mitochondrial functions of the electron-transport chain. This review presents experimental evidence that supports this concept and discusses the significance of this newly reported ability for cardiac and skeletal muscle functions.



Isoform-specific functions of Na,K-ATPase in skeletal muscle
Аннотация
The published data and the results of the author’s own research in the field of the molecular and functional diversity of Na,K-ATPases are reviewed. Na,K-ATPase is an integral membrane protein that maintains the concentration gradients of Na+ and K+ that are essential for electrogenesis, excitability, and several other processes of cellular transport. Most of the Na,K-ATPase of vertebrates is found in the skeletal muscle tissue, which co-expresses the α1 and α2 isoforms of the catalytic and transport α-subunit of Na,KATPase. The activity of Na,K-ATPase is crucial for the contractile function and prolonged activity of skeletal muscle. The data that have accumulated indicate that the α1 isoform of Na,K-ATPase fulfills the major pumping function. The α2 isoform fulfills additional functions related to the specific membrane localization of the protein, the functional interactions with the proteins and lipids of the environment, and fine-tuned regulation by a variety of factors, including motor activity.



Cell Biophysics
A comparative study of the effects of Pr3+ and La3+ ions on calcium dependent processes in frog cardiac muscle and rat heart mitochondria
Аннотация
The inotropic effect of Pr3+ and La3+ ions on the heart muscle of frog Rana ridibunda, as well as the influence of the ions on respiration, swelling, and the potential (ΔΨmito) on the inner membrane of Ca2+- loaded rat heart mitochondria, energized by glutamate and malate or succinate in the presence of rotenone were studied. It was found that 2 mM Pr3+ in Ringer’s solution reduces the force of spontaneous contractions and those induced by electrical stimulation in the heart; it had a negative chronotropic effect, decreasing the frequency of spontaneous contractions. Pr3+ and La3+ prevented a decrease in the 2,4-dinitrophenol (DNP)- uncoupled respiration of energized rat heart mitochondria, swelling of these organelles in salt media, and a reduction in ΔΨmito on the inner mitochondrial membrane that were induced by Ca2+ ions. Retardation by Pr3+ and La3+ ions of these calcium-induced effects may suggest that in the inner mitochondrial membrane these metals inhibit the opening of the mitochondrial permeability transition pore caused by Ca2+ overload of mitochondria. The data we obtained are important for a better understanding of the mechanisms of the damaging action of rare-earth elements on Ca2+-dependent processes in the vertebrate myocardium.



The role of inwardly rectifying potassium channels in the relaxation of rat hind-limb arteries
Аннотация
An increase in the extracellular K+ concentration, which causes relaxation of arteries due to the activation of inwardly rectifying potassium channels, can occur in some organs under intensive metabolism, as well as endothelium-dependent hyperpolarization. The aim of this work was a comparison of the contribution of these channels in the regulation of the tone of arteries that supply skeletal muscles and the skin. The reactions of skin-region arteries (a subcutaneous artery and its branch) and gastrocnemius muscle arteries were recorded in the isometric mode. During the contraction caused by α1-adrenoceptor agonist, the relaxation reactions upon an increase in extracellular K+ concentration and on acetylcholine in the presence of inhibitors of NO-synthase and cyclooxygenase were recorded (to detect the effects of endothelium-dependent hyperpolarization). The muscle arteries at both effects showed a pronounced relaxation, which was strongly suppressed by Ba2+ ions (blockers of inwardly rectifying potassium channels); both reactions did not exceed 20% in the skin arteries. Thus, the regulatory effect of inwardly rectifying potassium channels in the muscle arteries is much higher than in the skin arteries which is consistent with the idea about the functioning of these arteries in the organism.



The autowave electromechanical activity of the Physarum polycephalum plasmodium
Аннотация
The aim of this work is to clarify the role of the electrical activity of the Physarum polycephalum plasmodium in the control of the contractile activity and self-organization of the directed locomotion. This single-celled organism with a non-excitable membrane is a classic object that is used in studies of amoeboid motility. Its patterns of motor behavior and signal systems are common for many tissue cells. The presence of 50 mM KCl in an agar substrate under half of a separate plasmodial strand strongly inhibits the formation of the frontal zone and leads to sharp morphological polarization of the strand, which suggests the involvement of electrical processes in the autowave self-organization of the plasmodial structure. The gigantic sizes of the plasmodium make it possible to record its electrical activity simultaneously at different parts of the cell. It has been established that potentials and currents at parts of the plasmodium that are distant from each other oscillate synchronously and differ only in the shape of the signals, probably due to differences in the phases or the number of excited harmonics. We recorded currents (~50 pA) of single ion channels of the plasmodial membrane using the classical local voltage-clamp method. It has been found that the oscillation spectrum of the current that is generated by the plasmodium has high-frequency fluctuations, which are probably connected with periodic detachments of the membrane from the cytoskeleton during the formation and growth of the pseudopodia. It has been also shown that neomycin, a substrate inhibitor of phospholipase C, prevents oscillations of both the mechanical and electrical activity of the plasmodium. This is consistent with its well-established ability to inhibit mechanosensitive Ca2+ channels, which are apparently present in the plasmodial membrane. These data indicate the presence of a general signal system that is linked with the dynamics of the membrane- cytoskeleton association, which could be involved in the galvano- and chemotaxis of amoeboid cells.



Complex Systems Biophysics
Changes in the functional state of spinal-cord cell structures under gravitational unloading
Аннотация
The functional properties of the spinal-cord structures of experimental rats under a 7-day gravitational unloading were assessed using the method of transcranial magnetic stimulation. Hypogravity was modeled by hanging the animals by their tails in an antiorthostatic position. The gastrocnemius muscle potentials evoked by magnetic stimulation of the efferent structures of the spinal cord were registered. We found that gravitational unloading causes significant changes in motor-potential parameters and the central motor transmission time. We propose that the cause of the revealed transformations is afferent inflow limitation, first of all the motor type, as well as adaptation of the central nervous system to new conditions of motor activity.



The effects of afterload and stimulation delay on the slow force response in the heterogeneous myocardium
Аннотация
The results of numerical simulations and physiological experiments that assessed the dependence of the intramyocardial slow force response under an afterload in the heterogeneous myocardium are described. Muscle duplexes of our design were used as the simplest experimental and theoretical models of the heterogeneous myocardium. It is shown that the degree of the slow force response increases with an afterload and the time of the stimulation delay between the elements of the duplex. This effect is explainable by an increase in the time of the mechanical interaction between the duplex elements in the isometric phase of contraction. This leads to changes in individual contractility, the configuration of the action potential, and the kinetic characteristics of intracellular calcium in cardiomyocytes of interacting muscles.



Cooperativity in mechano-calcium feedbacks in the myocardium: Some conceptual discrepancies and overcoming inconsistency within the framework of a mathematical model
Аннотация
Mechano-calcium feedbacks that provide fine tuning of electrical and calcium activation of the heart muscle to mechanical conditions of contractions are an important element of electromechanical coupling as a key mechanism of the autoregulation of the contractile activity of the myocardium. A large quantity of experimental and theoretical evidence supports the cooperative dependence of the calcium-troponin complex kinetics on the cross-bridge concentration as a principal mechanism that underlies the mechano-calcium feedback in the intact myocardium. At the same time, experiments performed using skinned myocardial preparations have demonstrated that mechanical conditions significantly affected only the calcium sensitivity of the Ca2+–force relationship rather than its Hill coefficient of cooperativity. These data make some investigators doubt the contribution of cooperativity to the mechano-calcium feedbacks. To overcome these arising discrepancies, we propose an improved conception of cooperativity that reveals the extent of intensity differently in the steady state and in transitional processes. The proposed conception enables us to reproduce and explain both the mechanodependence of calcium activation in the intact myocardium and the results with skinned muscle within the framework of a mathematical model.



The parameters of cardiac-muscle repolarization: The measurement and information value
Аннотация
We performed a comparative analysis of different classes of algorithms for computer-assisted cardiological diagnostics. The concepts of an “internal” and “external” image of myocardial ischemia were formulated. We also discussed the biophysical aspects for the basic indices of spatial heterogeneity of the repolarization process in the myocardium, as well as the problems of measurement of the corresponding parameters. The experimental part was performed on two groups of patients. Both experimental and control groups included two sets of 12-lead electrocardiograms of real patients: “Normal” and “Ischemia” (with lateral localization). The experimental group consisted of 202 and 143 electrocardiograms, while the control group consisted of 200 and 91 electrocardiograms, respectively. The electrocardiograms were verified according to the Minnesota Code criteria.



The realization of a mechanical signal during gravitational unloading: The response of mTORC1 targets to eccentric contractions
Аннотация
The aim of this study was to assess the response of key mTORC1 substrates to a bout of contractile stimuli under different times of functional unloading. Functional unloading of hind-limb muscles was carried out by the method of antiorthostatic suspension. Twenty-eight Wistar rats were divided into four groups: control, and hindlimb suspension for 1, 3, and 7 days. After hindlimb suspension, isolated soleus muscles of rats were subjected to a bout of ex vivo eccentric contractions. The contents of phosphorylated forms of p70s6k and 4E-BP1 were then determined using western blotting. It was found that an eccentric load resulted in a significant increase in p70s6k phosphorylation and reduced 4E-BP1 phosphorylation both in control and suspended rats, but in the case of suspension the response was dramatically reduced. Thus, it can be concluded that a bout of eccentric contractions of isolated rat soleus muscle during functional unloading causes a weaker activation of the Akt-mTORC1-p70s6k signaling pathway compared with the control. This may indicate that it is important to maintain muscle tone for a more efficient muscle perception of an external mechanical signal and subsequent activation of anabolic signaling pathways.



A modified mathematical model of the anatomy of the cardiac left ventricle
Аннотация
A modification of the mathematical model of the shape and fiber direction field of the left cardiac ventricle is presented. The model was developed based on the idea of nested spiral surfaces. The ventricle is composed of surfaces that model myocardial layers. Each layer is filled with curves corresponding to myocardial fibers. The tangents to these curves form the myofiber direction field. A modified spherical coordinate system is linked with the model left ventricle, where the ventricular boundaries are coordinate surfaces. The model is based on echocardiographic, computed-tomography, or magnetic-resonance-imaging data. For this purpose, four-chamber and two-chamber echocardiography views or sections along the long axis of the left ventricle from these tomographic data in several positions are approximated with a model profile. To construct a 3D model, we then interpolate model parameters by periodic cubic splines and the vector field of the tangents to the model fibers is calculated. For verification of the model, we used diffusion-tensor magneticresonance-imaging data of the human heart.



The response of skeletal muscle to alcohol abuse: Gender differences
Аннотация
A gender analysis has been carried out to analyze changes in intracellular signaling pathways that lead to the development of chronic alcoholic myopathy. It is known that acute or chronic alcohol intoxication can result in alcohol-induced lesions in skeletal muscles. Chronic alcoholic myopathy occurs much more frequently and can develop either independently or in combination with other forms of alcoholic disease (liver and heart lesions, malabsorption syndrome, or alcohol polyneuropathy). This disease is manifested by atrophy of skeletal muscles and a performance decrement. Most of the studies on the pathogenesis of chronic alcoholic myopathy have been carried out on male patients. Studies on alcoholic myopathy-induced muscle damage in females have not been previously reported.



A mathematical model of hind-limb control in cats when walking backward
Аннотация
The “walking backward” mode was achieved within a single model of cat hind-limb locomotion with the balance maintenance only due to a change in the controlling actions (in addition to the “forward walking” mode). The skeletal part of the model contains the spine, pelvis, and two limbs consisting of the thigh, shin, and foot. The hip joint and spine mount in the thoracic region have three degrees of freedom; the knee and ankle joints have one degree of freedom. The pelvis is rigidly connected to the spine. Control is performed by model muscles (flexors and extensors of the thigh, shin, and foot). The muscle activation is performed by the effects that are typical for motoneurons that control the muscles. The feet in the support phase touch the treadmill, which moves at a constant speed. The model qualitatively reproduces multiple characteristics of feline movements during forward and backward walking (supporting its validity).



The electrical resistivity of a segment of the tail, lungs, liver, and intercostal muscles of the grass snake during in vivo cooling
Аннотация
The electrical resistivity of tissues, organs, and body segments of reptiles (grass snakes) during experimental cooling has been studied for the first time. The observed significant decrease in the phase angle recorded in a tail segment and the significant decrease in the electrical resistivity of the liver and lung during body cooling are associated with the blood-flow redistribution from the tail to the mid-body, liver, and lungs.


