Similarity of decay-associated spectra for tryptophan fluorescence of proteins with different structures


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Abstract

Tryptophan fluorescence lifetimes were analyzed for three proteins: human serum albumin, bovine serum albumin, and bacterial luciferase, which contain one, two, and seven tryptophan residues, respectively. For all of the proteins, the fluorescence decays were fitted by three lifetimes: τ1 = 6–7 ns, τ2 = 2.0–2.3 ns, and τ3 ≤ 0.1 ns (the native state), and τ1 = 4.4–4.6 ns, τ2 = 1.7–1.8 ns, and τ3 ≤ 0.1 ns (the denatured state). Corresponding decay-associated spectra had similar peak wavelengths and spectrum half-widths both in the native state (\(\lambda _{\max }^{{\tau _1}} = 324nm\), \(\lambda _{\max }^{{\tau _2}} = 328nm\), and \(\lambda _{\max }^{{\tau _3}} = 315nm\)), and in the denatured state (\(\lambda _{\max }^{{\tau _1}} = 350nm\), \(\lambda _{\max }^{{\tau _2}} = 343nm\), and \(\lambda _{\max }^{{\tau _3}} = 317nm\)). The differences in the steady-state spectra of the studied proteins were accounted for the individual ratio of the lifetime component contributions. The lifetime components were compared with a classification of tryptophan residues in the structure of these proteins within the discrete states model.

About the authors

E. V. Nemtseva

Siberian Federal University; Institute of Biophysics, Siberian Branch

Author for correspondence.
Email: enemtseva@sfu-kras.ru
Russian Federation, Svobodnyi pr. 79, Krasnoyarsk, 660041; Akademgorodok 50/50, Krasnoyarsk, 660036

O. O. Lashchuk

Siberian Federal University

Email: enemtseva@sfu-kras.ru
Russian Federation, Svobodnyi pr. 79, Krasnoyarsk, 660041

M. A. Gerasimova

Siberian Federal University

Email: enemtseva@sfu-kras.ru
Russian Federation, Svobodnyi pr. 79, Krasnoyarsk, 660041

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